STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSCT_1589H(+)-transporting two-sector ATPase. (464 aa)    
Predicted Functional Partners:
OSCT_1588
TrkA domain-containing protein.
 
 
 0.982
OSCT_0990
Sodium/hydrogen exchanger; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family.
  
 
 0.753
OSCT_2016
Sodium/hydrogen exchanger; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family.
  
 
 0.753
OSCT_0751
TrkA-N domain protein.
  
 
 0.637
OSCT_1596
TrkA domain-containing protein.
  
 
 0.637
OSCT_1597
TrkA-N domain protein.
  
 
 0.637
OSCT_1587
TatD family hydrolase.
  
    0.586
OSCT_1586
Transglutaminase domain-containing protein.
       0.487
OSCT_0402
NADH dehydrogenase (quinone).
     
 0.470
OSCT_1585
acetoacetyl-CoA synthetase.
       0.470
Your Current Organism:
Oscillochloris trichoides
NCBI taxonomy Id: 765420
Other names: O. trichoides DG-6, Oscillochloris trichoides DG-6, Oscillochloris trichoides str. DG-6, Oscillochloris trichoides strain DG-6
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