STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSCT_1607LPPG:FO 2-phospho-L-lactate transferase. (312 aa)    
Predicted Functional Partners:
fbiD
Hypothetical protein; Guanylyltransferase that catalyzes the activation of phosphoenolpyruvate (PEP) as enolpyruvoyl-2-diphospho-5'-guanosine, via the condensation of PEP with GTP. It is involved in the biosynthesis of coenzyme F420, a hydride carrier cofactor.
 
  
 0.992
OSCT_1313
F420-dependent oxidoreductase.
 
 
 0.977
OSCT_2563
Luciferase family protein.
 
   
 0.811
OSCT_1604
Luciferase family protein.
 
   
 0.790
OSCT_1132
Luciferase-like monooxygenase.
 
   
 0.785
OSCT_1606
Glutamine amidotransferase of anthranilate synthase.
  
    0.773
OSCT_1723
Luciferase-like protein.
 
   
 0.723
OSCT_1314
Nitroreductase.
 
 
 0.596
OSCT_0874
Pyridoxamine 5'-phosphate oxidase-related FMN-binding.
  
     0.493
OSCT_1609
Glycosyl transferase group 1.
       0.441
Your Current Organism:
Oscillochloris trichoides
NCBI taxonomy Id: 765420
Other names: O. trichoides DG-6, Oscillochloris trichoides DG-6, Oscillochloris trichoides str. DG-6, Oscillochloris trichoides strain DG-6
Server load: medium (56%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.