Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
OSCT_1611Lipopolysaccharide biosynthesis protein. (215 aa)    
Predicted Functional Partners:
OSCT_1612
Exopolysaccharide tyrosine-protein kinase.
 0.987
OSCT_0002
ATPase involved in chromosome partitioning-like protein.
 
 0.890
OSCT_0475
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase.
 
  
 0.853
OSCT_0035
Undecaprenyl-phosphate galactose phosphotransferase.
 
  
 0.847
OSCT_2644
Undecaprenyl-phosphate glucose phosphotransferase.
 
  
 0.844
OSCT_1610
Lipopolysaccharide biosynthesis protein.
       0.817
OSCT_1609
Glycosyl transferase group 1.
  
    0.775
OSCT_0688
ATPase involved in chromosome partitioning-like protein.
  
 0.569
OSCT_2966
Hypothetical protein; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.
  
 0.569
OSCT_1607
LPPG:FO 2-phospho-L-lactate transferase.
       0.426
Your Current Organism:
Oscillochloris trichoides
NCBI taxonomy Id: 765420
Other names: O. trichoides DG-6, Oscillochloris trichoides DG-6, Oscillochloris trichoides str. DG-6, Oscillochloris trichoides strain DG-6
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