Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
OSCT_1613Cyclic nucleotide-binding protein. (227 aa)    
Predicted Functional Partners:
OSCT_0551
Glutamate synthase (ferredoxin).
    
 0.897
OSCT_2720
Pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein.
    
 0.822
OSCT_1614
Hypothetical protein.
       0.773
OSCT_2704
Cyclic nucleotide-binding protein.
  
     0.684
OSCT_3007
Adenylyl cyclase class-3/4/guanylyl cyclase.
 
 0.669
OSCT_1227
PAS sensor protein.
 
 
 0.615
OSCT_1616
Glycosyl hydrolase 53 protein.
     
 0.542
OSCT_1615
Alpha-2-macroglobulin domain-containing protein.
       0.538
OSCT_1932
PAS fold family protein.
 
 
 0.537
OSCT_2071
Adenylate/guanylate cyclase; Belongs to the adenylyl cyclase class-4/guanylyl cyclase family.
  
 0.524
Your Current Organism:
Oscillochloris trichoides
NCBI taxonomy Id: 765420
Other names: O. trichoides DG-6, Oscillochloris trichoides DG-6, Oscillochloris trichoides str. DG-6, Oscillochloris trichoides strain DG-6
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