Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
OSCT_1614Hypothetical protein. (450 aa)    
Predicted Functional Partners:
OSCT_1613
Cyclic nucleotide-binding protein.
       0.773
OSCT_2022
SNF2-related helicase.
   
 0.620
OSCT_1615
Alpha-2-macroglobulin domain-containing protein.
       0.538
OSCT_1616
Glycosyl hydrolase 53 protein.
       0.538
OSCT_1200
Hypothetical protein.
   
 0.504
OSCT_1214
Helicase domain-containing protein.
   
 0.504
OSCT_2528
DEAD/DEAH box helicase domain protein; Belongs to the DEAD box helicase family.
   
 0.504
OSCT_2626
DEAD/DEAH box helicase domain protein; Belongs to the DEAD box helicase family.
   
 0.504
OSCT_0894
Deoxycytidine triphosphate deaminase.
 
      0.502
OSCT_1617
Hypothetical protein.
       0.465
Your Current Organism:
Oscillochloris trichoides
NCBI taxonomy Id: 765420
Other names: O. trichoides DG-6, Oscillochloris trichoides DG-6, Oscillochloris trichoides str. DG-6, Oscillochloris trichoides strain DG-6
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