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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSCT_1616Glycosyl hydrolase 53 protein. (590 aa)    
Predicted Functional Partners:
OSCT_0035
Undecaprenyl-phosphate galactose phosphotransferase.
    
  0.932
OSCT_0475
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase.
    
  0.932
OSCT_2644
Undecaprenyl-phosphate glucose phosphotransferase.
    
  0.932
OSCT_2624
Hypothetical protein.
   
   0.880
OSCT_1386
Glycoside hydrolase family 2 TIM barrel.
 
  
 0.864
OSCT_1013
Glycoside hydrolase family protein; Belongs to the glycosyl hydrolase 31 family.
  
 0.855
OSCT_1615
Alpha-2-macroglobulin domain-containing protein.
 
     0.847
OSCT_0469
Hypothetical protein.
   
 
 0.817
OSCT_2967
Hypothetical protein; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
 
  
 0.815
OSCT_1254
Glycosyltransferase 36.
    
 0.801
Your Current Organism:
Oscillochloris trichoides
NCBI taxonomy Id: 765420
Other names: O. trichoides DG-6, Oscillochloris trichoides DG-6, Oscillochloris trichoides str. DG-6, Oscillochloris trichoides strain DG-6
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