STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSCT_1629Major facilitator transporter. (403 aa)    
Predicted Functional Partners:
OSCT_2012
Chromosome segregation ATPase-like protein.
  
     0.696
OSCT_1225
Major facilitator transporter.
  
     0.675
OSCT_0365
Metallophosphoesterase.
  
     0.648
OSCT_1818
Hypothetical protein.
  
     0.645
OSCT_2134
Band 7 protein.
  
     0.613
OSCT_2640
Hypothetical protein.
  
     0.601
OSCT_1630
methylmalonyl-CoA mutase, large subunit.
       0.556
OSCT_1628
Carbamoyl-phosphate synthase L chain ATP-binding.
       0.546
OSCT_2504
GCN5-related N-acetyltransferase.
  
     0.542
OSCT_1627
Biotin/lipoyl attachment domain-containing protein.
       0.539
Your Current Organism:
Oscillochloris trichoides
NCBI taxonomy Id: 765420
Other names: O. trichoides DG-6, Oscillochloris trichoides DG-6, Oscillochloris trichoides str. DG-6, Oscillochloris trichoides strain DG-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.