STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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[Homology]
Score
OSCT_1632Hydrogenase (NiFe) small subunit HydA. (367 aa)    
Predicted Functional Partners:
OSCT_1633
Nickel-dependent hydrogenase, large subunit; Belongs to the [NiFe]/[NiFeSe] hydrogenase large subunit family.
 
 0.999
OSCT_1634
Ni/Fe-hydrogenase, b-type cytochrome subunit.
 
 
 0.989
OSCT_1635
Hydrogenase expression/formation protein.
 
  
 0.920
OSCT_2720
Pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein.
    
 0.915
OSCT_2969
Pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein.
     
 0.875
OSCT_2663
Polysulphide reductase NrfD.
  
  
 0.745
OSCT_0222
Multi-sensor signal transduction histidine kinase.
   
 0.714
OSCT_2703
Multi-sensor hybrid histidine kinase.
   
 0.714
OSCT_2609
Hydrogenase accessory protein HypB.
 
  
 0.676
OSCT_2591
Fe-S-cluster-containing hydrogenase components 1-like protein.
  
 
 0.662
Your Current Organism:
Oscillochloris trichoides
NCBI taxonomy Id: 765420
Other names: O. trichoides DG-6, Oscillochloris trichoides DG-6, Oscillochloris trichoides str. DG-6, Oscillochloris trichoides strain DG-6
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