STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSCT_1649Hypothetical protein. (160 aa)    
Predicted Functional Partners:
OSCT_2365
Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
    
  0.817
OSCT_2591
Fe-S-cluster-containing hydrogenase components 1-like protein.
     
  0.725
OSCT_2664
Fe-S-cluster-containing hydrogenase components 1-like protein.
     
  0.725
OSCT_1650
Shikimate/quinate 5-dehydrogenase.
       0.501
OSCT_1651
Alpha/beta hydrolase fold-containing protein.
       0.501
OSCT_2395
Hypothetical protein.
    
 0.449
OSCT_1647
Hypothetical protein.
       0.430
OSCT_1648
ErfK/YbiS/YcfS/YnhG family protein.
       0.430
htpX
Peptidase M48 Ste24p; Belongs to the peptidase M48B family.
    
 0.409
Your Current Organism:
Oscillochloris trichoides
NCBI taxonomy Id: 765420
Other names: O. trichoides DG-6, Oscillochloris trichoides DG-6, Oscillochloris trichoides str. DG-6, Oscillochloris trichoides strain DG-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.