STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSCT_1692ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD. (1102 aa)    
Predicted Functional Partners:
OSCT_1690
Cytochrome bd ubiquinol oxidase subunit I.
  
 0.999
OSCT_1691
Cytochrome d ubiquinol oxidase, subunit II.
 
  
 0.999
OSCT_0754
ABC transporter related protein.
 
 
 
0.732
OSCT_0755
ABC transporter related protein.
 
 
 
0.732
OSCT_3111
ABC transporter related protein.
 
  0.731
OSCT_1970
ABC transporter related protein.
 
 
 
0.729
OSCT_1969
ABC transporter related protein.
 
 
 
0.728
OSCT_3110
ABC transporter related protein.
 
 
 
0.716
OSCT_3112
ABC transporter related protein.
 
 
 
0.712
OSCT_3114
ABC transporter related protein.
  
 
 
0.666
Your Current Organism:
Oscillochloris trichoides
NCBI taxonomy Id: 765420
Other names: O. trichoides DG-6, Oscillochloris trichoides DG-6, Oscillochloris trichoides str. DG-6, Oscillochloris trichoides strain DG-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.