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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSCT_1704Rare lipoprotein A. (248 aa)    
Predicted Functional Partners:
OSCT_1703
Serine/threonine protein kinase.
       0.664
OSCT_1194
Hypothetical protein.
  
     0.636
OSCT_1193
Hypothetical protein.
  
     0.613
OSCT_1702
Two-component hybrid sensor and regulator.
 
     0.576
OSCT_1701
NUDIX hydrolase; Belongs to the Nudix hydrolase family.
 
     0.541
OSCT_2502
Regulator of chromosome condensation RCC1.
  
     0.519
OSCT_0226
PAS/PAC sensor signal transduction histidine kinase.
  
     0.509
OSCT_0237
Hypothetical protein.
  
   
 0.504
OSCT_1705
Heat shock protein Hsp20; Belongs to the small heat shock protein (HSP20) family.
       0.488
OSCT_1980
Hypothetical protein.
  
     0.484
Your Current Organism:
Oscillochloris trichoides
NCBI taxonomy Id: 765420
Other names: O. trichoides DG-6, Oscillochloris trichoides DG-6, Oscillochloris trichoides str. DG-6, Oscillochloris trichoides strain DG-6
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