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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSCT_1780Hypothetical protein. (479 aa)    
Predicted Functional Partners:
OSCT_1779
Signal transduction protein with Nacht domain.
     0.836
OSCT_3039
Phospholipid/glycerol acyltransferase.
  
     0.584
OSCT_1775
TPR domain protein.
 
     0.501
OSCT_2116
Peptidase C14, caspase catalytic subunit p20.
 
    0.501
OSCT_2800
NB-ARC domain-containing protein.
 
     0.498
OSCT_1267
SLEI family.
 
     0.437
OSCT_3007
Adenylyl cyclase class-3/4/guanylyl cyclase.
 
  
  0.428
OSCT_3040
NAD-dependent epimerase/dehydratase.
  
     0.428
OSCT_1139
WD-40 repeat-containing protein.
 
    0.422
OSCT_2085
Adenylate/guanylate cyclase.
  
  
  0.419
Your Current Organism:
Oscillochloris trichoides
NCBI taxonomy Id: 765420
Other names: O. trichoides DG-6, Oscillochloris trichoides DG-6, Oscillochloris trichoides str. DG-6, Oscillochloris trichoides strain DG-6
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