Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
OSCT_1782Cell division FtsK/SpoIIIE. (411 aa)    
Predicted Functional Partners:
OSCT_2505
Hypothetical protein.
 
  
 0.671
OSCT_1726
Hypothetical protein.
  
     0.655
OSCT_1781
AAA ATPase.
       0.575
OSCT_2786
Polypeptide-transport-associated domain-containing protein; Essential cell division protein.
   
 
 0.477
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
     
 0.467
OSCT_1783
Hypothetical protein.
  
  
 0.462
OSCT_0279
Transcriptional regulator-like protein.
  
     0.424
OSCT_0620
Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.
  
  
 0.418
OSCT_0237
Hypothetical protein.
  
     0.409
OSCT_1965
Hypothetical protein.
  
 
   0.404
Your Current Organism:
Oscillochloris trichoides
NCBI taxonomy Id: 765420
Other names: O. trichoides DG-6, Oscillochloris trichoides DG-6, Oscillochloris trichoides str. DG-6, Oscillochloris trichoides strain DG-6
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