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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSCT_1810Von Willebrand factor type A. (853 aa)    
Predicted Functional Partners:
OSCT_1811
Hypothetical protein.
     0.960
OSCT_1812
Hypothetical protein.
 
  
 0.957
OSCT_1968
Hypothetical protein.
     0.882
OSCT_0422
Hypothetical protein.
 
 
  0.845
OSCT_0735
ABC-2 type transporter.
 
     0.826
OSCT_1967
Protein of unknown function DUF58.
 
  
 0.818
OSCT_1813
Hypothetical protein.
       0.785
OSCT_1965
Hypothetical protein.
 
  
  0.779
OSCT_0421
ABC transporter related protein.
 
    0.759
OSCT_2341
Magnesium chelatase ATPase subunit D; Involved in bacteriochlorophyll biosynthesis; introduces a magnesium ion into protoporphyrin IX to yield Mg-protoporphyrin IX.
  
 0.755
Your Current Organism:
Oscillochloris trichoides
NCBI taxonomy Id: 765420
Other names: O. trichoides DG-6, Oscillochloris trichoides DG-6, Oscillochloris trichoides str. DG-6, Oscillochloris trichoides strain DG-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.