STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSCT_1818Hypothetical protein. (838 aa)    
Predicted Functional Partners:
OSCT_0551
Glutamate synthase (ferredoxin).
    
  0.929
OSCT_2680
Hypothetical protein.
 
 
   0.809
OSCT_0472
Cytochrome c class I.
  
 0.797
OSCT_2596
Cytochrome c oxidase, subunit II.
  
 0.797
OSCT_1817
Biotin/lipoate A/B protein ligase.
       0.790
OSCT_2442
Hypothetical protein.
 
  
  0.775
OSCT_2012
Chromosome segregation ATPase-like protein.
  
     0.773
OSCT_2134
Band 7 protein.
  
     0.771
OSCT_2320
Cyclic nucleotide-binding protein.
  
    0.766
OSCT_0365
Metallophosphoesterase.
 
     0.763
Your Current Organism:
Oscillochloris trichoides
NCBI taxonomy Id: 765420
Other names: O. trichoides DG-6, Oscillochloris trichoides DG-6, Oscillochloris trichoides str. DG-6, Oscillochloris trichoides strain DG-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.