Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
OSCT_1855Phosphoheptose isomerase. (188 aa)    
Predicted Functional Partners:
OSCT_0568
GHMP kinase.
 
 0.986
OSCT_3160
rfaE bifunctional protein.
  
 0.984
OSCT_1296
PfkB domain protein.
  
 0.968
OSCT_2896
Glycosyl transferase group 1.
   
  0.907
OSCT_1761
Glycosyl transferase group 1.
   
  0.855
OSCT_0740
Glycosyl transferase family protein.
 
   
 0.837
OSCT_1621
Glycosyl transferase group 1.
   
  0.744
OSCT_1960
Glycogen synthase.
   
  0.652
OSCT_1856
D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
       0.592
OSCT_2899
Glycosyl transferase family 2.
   
 0.575
Your Current Organism:
Oscillochloris trichoides
NCBI taxonomy Id: 765420
Other names: O. trichoides DG-6, Oscillochloris trichoides DG-6, Oscillochloris trichoides str. DG-6, Oscillochloris trichoides strain DG-6
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