STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
OSCT_1872OsmC family protein. (167 aa)    
Predicted Functional Partners:
OSCT_1871
Inositol monophosphatase.
       0.773
OSCT_0955
ABC-type dipeptide transport system periplasmic component-like protein.
  
     0.643
OSCT_1274
Methyltransferase type 11.
  
     0.620
OSCT_2134
Band 7 protein.
  
     0.619
OSCT_1818
Hypothetical protein.
  
     0.591
OSCT_2012
Chromosome segregation ATPase-like protein.
  
     0.563
OSCT_0365
Metallophosphoesterase.
  
     0.552
OSCT_1870
Molybdate ABC transporter, inner membrane subunit; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
     
 0.512
OSCT_2320
Cyclic nucleotide-binding protein.
 
     0.505
OSCT_2096
Hypothetical protein.
  
     0.430
Your Current Organism:
Oscillochloris trichoides
NCBI taxonomy Id: 765420
Other names: O. trichoides DG-6, Oscillochloris trichoides DG-6, Oscillochloris trichoides str. DG-6, Oscillochloris trichoides strain DG-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.