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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSCT_1875Glycosyl transferase family protein. (247 aa)    
Predicted Functional Partners:
OSCT_1876
Hypothetical protein.
       0.773
OSCT_1877
Hypothetical protein.
       0.714
OSCT_1385
Glycosyl transferase family 2.
 
 
  0.637
ruvB
Holliday junction DNA helicase B; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing.
       0.586
OSCT_1878
ATPase.
       0.545
OSCT_1881
AAA ATPase central domain protein; Belongs to the AAA ATPase family.
  
   0.542
OSCT_1879
Hypothetical protein.
       0.516
OSCT_1880
Hypothetical protein.
       0.497
OSCT_2899
Glycosyl transferase family 2.
  
 
 0.490
OSCT_2645
Glycosyl transferase family 2.
 
 
  0.475
Your Current Organism:
Oscillochloris trichoides
NCBI taxonomy Id: 765420
Other names: O. trichoides DG-6, Oscillochloris trichoides DG-6, Oscillochloris trichoides str. DG-6, Oscillochloris trichoides strain DG-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.