STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSCT_1884BioY protein. (211 aa)    
Predicted Functional Partners:
OSCT_1699
Cobalt ABC transporter, ATPase subunit; Part of an ABC transporter complex. Responsible for energy coupling to the transport system.
 
 
 0.894
OSCT_1698
Cobalt ABC transporter, inner membrane subunit CbiQ.
  
 0.889
OSCT_2412
Cobalt ABC transporter, inner membrane subunit CbiQ.
  
 0.889
OSCT_2411
Cobalt ABC transporter, ATPase subunit; Part of an ABC transporter complex. Responsible for energy coupling to the transport system.
   
 0.879
OSCT_1882
ATPase associated with various cellular activities AAA_5.
       0.553
OSCT_1883
Hypothetical protein.
       0.553
OSCT_1880
Hypothetical protein.
       0.514
OSCT_1881
AAA ATPase central domain protein; Belongs to the AAA ATPase family.
       0.514
OSCT_1879
Hypothetical protein.
       0.495
OSCT_1885
ABC transporter related protein.
       0.488
Your Current Organism:
Oscillochloris trichoides
NCBI taxonomy Id: 765420
Other names: O. trichoides DG-6, Oscillochloris trichoides DG-6, Oscillochloris trichoides str. DG-6, Oscillochloris trichoides strain DG-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.