Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
OSCT_1885ABC transporter related protein. (317 aa)    
Predicted Functional Partners:
OSCT_1886
Binding-protein-dependent transport systems inner membrane component.
 0.998
OSCT_1787
Substrate-binding region of ABC-type glycine betaine transport system.
 0.996
OSCT_1788
Binding-protein-dependent transport systems inner membrane component.
 0.993
OSCT_1870
Molybdate ABC transporter, inner membrane subunit; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
    
 0.907
OSCT_0044
ABC-2 type transporter.
      0.899
OSCT_3111
ABC transporter related protein.
 
      0.865
OSCT_0805
Hypothetical protein.
 
      0.805
OSCT_2273
Protein of unknown function DUF214.
 
      0.797
OSCT_1887
Protein tyrosine phosphatase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
  
  
 0.782
OSCT_1329
Protein of unknown function DUF214.
 
      0.768
Your Current Organism:
Oscillochloris trichoides
NCBI taxonomy Id: 765420
Other names: O. trichoides DG-6, Oscillochloris trichoides DG-6, Oscillochloris trichoides str. DG-6, Oscillochloris trichoides strain DG-6
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