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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSCT_1886Binding-protein-dependent transport systems inner membrane component. (208 aa)    
Predicted Functional Partners:
OSCT_1787
Substrate-binding region of ABC-type glycine betaine transport system.
 
 0.998
OSCT_1885
ABC transporter related protein.
 0.998
OSCT_1788
Binding-protein-dependent transport systems inner membrane component.
 
  
 
0.884
OSCT_1887
Protein tyrosine phosphatase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
  
    0.776
OSCT_1884
BioY protein.
       0.488
OSCT_2865
Binding-protein-dependent transport systems inner membrane component.
  
     0.486
OSCT_0349
Binding-protein-dependent transport systems inner membrane component.
  
     0.440
Your Current Organism:
Oscillochloris trichoides
NCBI taxonomy Id: 765420
Other names: O. trichoides DG-6, Oscillochloris trichoides DG-6, Oscillochloris trichoides str. DG-6, Oscillochloris trichoides strain DG-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.