STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSCT_1887Protein tyrosine phosphatase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family. (142 aa)    
Predicted Functional Partners:
OSCT_1885
ABC transporter related protein.
  
  
 0.782
OSCT_1886
Binding-protein-dependent transport systems inner membrane component.
  
    0.776
OSCT_0411
Protein tyrosine phosphatase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
     
  0.762
OSCT_0035
Undecaprenyl-phosphate galactose phosphotransferase.
  
 
 0.604
OSCT_0475
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase.
  
 
 0.604
OSCT_2644
Undecaprenyl-phosphate glucose phosphotransferase.
  
 
 0.604
OSCT_0469
Hypothetical protein.
  
 
 0.538
OSCT_1371
Hypothetical protein.
    
 
 0.515
OSCT_3215
Arsenical-resistance protein.
  
  
 0.507
OSCT_2899
Glycosyl transferase family 2.
  
  
 0.491
Your Current Organism:
Oscillochloris trichoides
NCBI taxonomy Id: 765420
Other names: O. trichoides DG-6, Oscillochloris trichoides DG-6, Oscillochloris trichoides str. DG-6, Oscillochloris trichoides strain DG-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.