STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSCT_1901acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. (392 aa)    
Predicted Functional Partners:
OSCT_1900
Hypothetical protein.
 
 0.999
OSCT_1135
hydroxymethylglutaryl-CoA synthase.
  
 0.994
OSCT_1424
AMP-dependent synthetase and ligase.
  
 0.989
OSCT_1137
Hypothetical protein.
  
 0.957
OSCT_2620
acyl-CoA dehydrogenase domain protein.
  
 0.950
OSCT_1198
acyl-CoA dehydrogenase domain-containing protein.
  
 0.948
OSCT_2720
Pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein.
  
 
 0.944
OSCT_1623
Malate synthase; Belongs to the malate synthase family.
   
 
 0.925
OSCT_1889
Citrate synthase I; Belongs to the citrate synthase family.
  
 0.925
OSCT_3002
Pyruvate carboxyltransferase.
  
 
 0.925
Your Current Organism:
Oscillochloris trichoides
NCBI taxonomy Id: 765420
Other names: O. trichoides DG-6, Oscillochloris trichoides DG-6, Oscillochloris trichoides str. DG-6, Oscillochloris trichoides strain DG-6
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