STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSCT_1904Protein of unknown function DUF1486. (122 aa)    
Predicted Functional Partners:
OSCT_1905
Tetratricopeptide TPR_2 repeat protein.
       0.762
OSCT_0507
Beta-ketoacyl synthase.
 
  
 0.735
OSCT_0983
Peptidase S8 and S53 subtilisin kexin sedolisin; Belongs to the peptidase S8 family.
  
     0.651
OSCT_1033
FHA domain-containing protein.
  
     0.629
OSCT_1225
Major facilitator transporter.
  
     0.608
OSCT_0955
ABC-type dipeptide transport system periplasmic component-like protein.
  
     0.575
OSCT_1903
Rhodanese domain protein.
       0.545
OSCT_1906
Hypothetical protein.
       0.532
OSCT_2479
Hypothetical protein.
  
     0.489
OSCT_1902
Rhodanese domain-containing protein.
       0.453
Your Current Organism:
Oscillochloris trichoides
NCBI taxonomy Id: 765420
Other names: O. trichoides DG-6, Oscillochloris trichoides DG-6, Oscillochloris trichoides str. DG-6, Oscillochloris trichoides strain DG-6
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