Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
OSCT_1907AMP-dependent synthetase and ligase. (569 aa)    
Predicted Functional Partners:
OSCT_2720
Pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein.
  
 
 0.935
OSCT_1900
Hypothetical protein.
  
 0.825
OSCT_2969
Pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein.
  
 
 0.784
OSCT_0507
Beta-ketoacyl synthase.
  
 0.642
OSCT_1424
AMP-dependent synthetase and ligase.
  
 0.634
OSCT_1623
Malate synthase; Belongs to the malate synthase family.
   
 0.566
OSCT_0551
Glutamate synthase (ferredoxin).
   
 
 0.529
OSCT_1889
Citrate synthase I; Belongs to the citrate synthase family.
  
 0.505
OSCT_2237
GCN5-related N-acetyltransferase.
  
 
 0.505
OSCT_2718
Hypothetical protein; Belongs to the citrate synthase family.
  
 0.505
Your Current Organism:
Oscillochloris trichoides
NCBI taxonomy Id: 765420
Other names: O. trichoides DG-6, Oscillochloris trichoides DG-6, Oscillochloris trichoides str. DG-6, Oscillochloris trichoides strain DG-6
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.