STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSCT_1909NADH dehydrogenase (quinone). (529 aa)    
Predicted Functional Partners:
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
 0.999
OSCT_0402
NADH dehydrogenase (quinone).
  
 0.999
OSCT_0831
Alpha/beta hydrolase fold-3 domain protein.
    
  0.999
OSCT_1324
Hypothetical protein.
 
 0.999
OSCT_1641
Alpha/beta hydrolase fold-containing protein.
   
 
 0.999
OSCT_1651
Alpha/beta hydrolase fold-containing protein.
   
 
 0.999
OSCT_1908
NADH dehydrogenase (ubiquinone) 24 kDa subunit.
 0.999
OSCT_1910
Bidirectional hydrogenase complex protein HoxU.
 
 0.999
OSCT_1988
Hypothetical protein.
 
 0.999
OSCT_2009
Putative NADH-ubiquinone oxidoreductase.
   
 0.999
Your Current Organism:
Oscillochloris trichoides
NCBI taxonomy Id: 765420
Other names: O. trichoides DG-6, Oscillochloris trichoides DG-6, Oscillochloris trichoides str. DG-6, Oscillochloris trichoides strain DG-6
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