Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
OSCT_1928Ammonium transporter. (390 aa)    
Predicted Functional Partners:
OSCT_3057
Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s).
 
 
  
 0.896
OSCT_1223
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s).
 
    
 0.848
OSCT_1227
PAS sensor protein.
  
 0.848
OSCT_0551
Glutamate synthase (ferredoxin).
 
  
 0.830
OSCT_2825
Diguanylate cyclase.
 
      0.809
OSCT_2633
Multi-sensor hybrid histidine kinase.
   
 0.770
OSCT_3147
GAF sensor signal transduction histidine kinase.
 
 
 0.764
OSCT_1310
PAS fold family protein.
  
 0.741
OSCT_0739
Sensory box histidine kinase/response regulator.
  
 0.680
OSCT_1850
PAS/PAC sensor signal transduction histidine kinase.
 
    
 0.628
Your Current Organism:
Oscillochloris trichoides
NCBI taxonomy Id: 765420
Other names: O. trichoides DG-6, Oscillochloris trichoides DG-6, Oscillochloris trichoides str. DG-6, Oscillochloris trichoides strain DG-6
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