Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
OSCT_1941Extracellular solute-binding protein family 1. (423 aa)    
Predicted Functional Partners:
OSCT_1381
Binding-protein-dependent transport systems inner membrane component.
 
 0.989
OSCT_1536
ABC transporter related protein; Belongs to the ABC transporter superfamily.
 
 0.979
OSCT_1380
Binding-protein-dependent transport systems inner membrane component.
 0.970
OSCT_0231
Extracellular solute-binding protein family 1.
  
  
  0.876
OSCT_0839
Alpha amylase catalytic region; Belongs to the glycosyl hydrolase 13 family.
 
  
 0.724
OSCT_1379
Extracellular solute-binding protein family 1.
  
  
 
0.674
OSCT_1940
Sugar (glycoside-Pentoside-hexuronide) transporter.
 
     0.625
OSCT_1382
Alpha amylase catalytic region.
 
  
 0.563
OSCT_1386
Glycoside hydrolase family 2 TIM barrel.
 
   
 0.555
OSCT_2194
Hypothetical protein.
  
  
 0.552
Your Current Organism:
Oscillochloris trichoides
NCBI taxonomy Id: 765420
Other names: O. trichoides DG-6, Oscillochloris trichoides DG-6, Oscillochloris trichoides str. DG-6, Oscillochloris trichoides strain DG-6
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