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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSCT_1941Extracellular solute-binding protein family 1. (423 aa)    
Predicted Functional Partners:
OSCT_1381
Binding-protein-dependent transport systems inner membrane component.
 
 0.994
OSCT_1380
Binding-protein-dependent transport systems inner membrane component.
 0.984
OSCT_1536
ABC transporter related protein; Belongs to the ABC transporter superfamily.
 
 0.968
OSCT_0839
Alpha amylase catalytic region; Belongs to the glycosyl hydrolase 13 family.
 
  
 0.750
OSCT_0231
Extracellular solute-binding protein family 1.
  
     0.742
OSCT_2189
Lytic transglycosylase catalytic.
    
   0.635
OSCT_1940
Sugar (glycoside-Pentoside-hexuronide) transporter.
 
    0.626
OSCT_1382
Alpha amylase catalytic region.
 
  
 0.605
OSCT_1286
Glutamine synthetase catalytic region.
    
   0.560
OSCT_2625
Glutamine synthetase, type I.
    
   0.560
Your Current Organism:
Oscillochloris trichoides
NCBI taxonomy Id: 765420
Other names: O. trichoides DG-6, Oscillochloris trichoides DG-6, Oscillochloris trichoides str. DG-6, Oscillochloris trichoides strain DG-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.