STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSCT_1966ATPase. (333 aa)    
Predicted Functional Partners:
OSCT_1967
Protein of unknown function DUF58.
 
  
 0.959
OSCT_1968
Hypothetical protein.
 
 
  0.878
OSCT_1812
Hypothetical protein.
 
  
 0.725
OSCT_1965
Hypothetical protein.
 
     0.660
OSCT_1586
Transglutaminase domain-containing protein.
 
  
 0.603
OSCT_1333
Hypothetical protein.
  
 0.595
OSCT_1969
ABC transporter related protein.
       0.547
OSCT_1964
Hypothetical protein.
       0.542
OSCT_1661
Protein of unknown function DUF58.
 
  
 0.501
OSCT_1810
Von Willebrand factor type A.
 
 
  0.501
Your Current Organism:
Oscillochloris trichoides
NCBI taxonomy Id: 765420
Other names: O. trichoides DG-6, Oscillochloris trichoides DG-6, Oscillochloris trichoides str. DG-6, Oscillochloris trichoides strain DG-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.