STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSCT_1984TPR repeat-containing protein. (450 aa)    
Predicted Functional Partners:
OSCT_2820
Tetratricopeptide TPR_2 repeat protein.
 
 0.937
OSCT_2221
Multi-sensor hybrid histidine kinase.
 
 0.913
glpK
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family.
  
 0.913
OSCT_1881
AAA ATPase central domain protein; Belongs to the AAA ATPase family.
   
 0.907
OSCT_1227
PAS sensor protein.
  
 0.902
OSCT_1424
AMP-dependent synthetase and ligase.
  
 0.882
OSCT_2877
Peptidylprolyl isomerase FKBP-type.
  
 0.872
OSCT_2073
Mov34/MPN/PAD-1 family protein.
    
 0.870
OSCT_3007
Adenylyl cyclase class-3/4/guanylyl cyclase.
 
 0.868
OSCT_1310
PAS fold family protein.
  
 0.857
Your Current Organism:
Oscillochloris trichoides
NCBI taxonomy Id: 765420
Other names: O. trichoides DG-6, Oscillochloris trichoides DG-6, Oscillochloris trichoides str. DG-6, Oscillochloris trichoides strain DG-6
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