close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSCT_1997Extracellular solute-binding protein. (404 aa)    
Predicted Functional Partners:
OSCT_1653
Polar amino acid ABC transporter, inner membrane subunit.
 
 0.945
OSCT_1227
PAS sensor protein.
   
 0.940
OSCT_1310
PAS fold family protein.
    
 0.936
OSCT_0739
Sensory box histidine kinase/response regulator.
    
 0.926
OSCT_1654
Polar amino acid ABC transporter, inner membrane subunit.
 
 
 0.922
OSCT_1652
ABC transporter related protein.
 
 0.919
OSCT_1426
ABC transporter related protein.
 
 0.885
OSCT_1228
Multi-sensor signal transduction histidine kinase.
   
 0.869
OSCT_1655
Extracellular solute-binding protein family 3; Belongs to the bacterial solute-binding protein 3 family.
  
  
 
0.772
OSCT_1427
Polar amino acid ABC transporter, inner membrane subunit.
 
 0.760
Your Current Organism:
Oscillochloris trichoides
NCBI taxonomy Id: 765420
Other names: O. trichoides DG-6, Oscillochloris trichoides DG-6, Oscillochloris trichoides str. DG-6, Oscillochloris trichoides strain DG-6
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.