STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSCT_2045Hypothetical protein. (316 aa)    
Predicted Functional Partners:
OSCT_2044
Hypothetical protein.
 
     0.959
OSCT_2043
Hypothetical protein.
       0.778
OSCT_2046
Pathogenesis-related transcriptional factor and ERF protein.
       0.737
OSCT_1437
TPR repeat-containing protein.
  
     0.710
OSCT_2757
Hypothetical protein.
  
     0.702
OSCT_1333
Hypothetical protein.
 
     0.698
OSCT_1046
RDD domain-containing protein.
  
     0.688
argB
Acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily.
       0.682
OSCT_2685
AAA-4 family protein.
  
     0.668
OSCT_1012
Hypothetical protein.
  
     0.653
Your Current Organism:
Oscillochloris trichoides
NCBI taxonomy Id: 765420
Other names: O. trichoides DG-6, Oscillochloris trichoides DG-6, Oscillochloris trichoides str. DG-6, Oscillochloris trichoides strain DG-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.