STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSCT_2058Putative acetyltransferase. (218 aa)    
Predicted Functional Partners:
OSCT_2899
Glycosyl transferase family 2.
 
  
 0.920
OSCT_2057
Putative phosphonate metabolism protein.
 
     0.869
OSCT_2054
Phosphonate metabolism protein PhnJ.
 
     0.850
OSCT_2053
Phosphonate metabolism protein PhnI.
 
     0.849
OSCT_2052
Phosphonate metabolism protein PhnH.
 
     0.843
OSCT_2056
Phosphonate C-P lyase system protein PhnL.
 
     0.842
OSCT_2055
Phosphonate ABC transporter, ATP-binding protein.
 
     0.815
OSCT_2051
Hypothetical protein.
 
     0.742
OSCT_2743
Hexapaptide repeat-containing transferase.
  
     0.739
OSCT_2744
Hexapaptide repeat-containing transferase.
  
     0.738
Your Current Organism:
Oscillochloris trichoides
NCBI taxonomy Id: 765420
Other names: O. trichoides DG-6, Oscillochloris trichoides DG-6, Oscillochloris trichoides str. DG-6, Oscillochloris trichoides strain DG-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.