STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSCT_2093Ferrous iron transport protein B. (272 aa)    
Predicted Functional Partners:
OSCT_2094
Ferrous iron transport protein B.
     0.994
OSCT_1177
Ferrous iron transport B domain-containing protein; Probable transporter of a GTP-driven Fe(2+) uptake system. Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. FeoB GTPase (TC 9.A.8) family.
 
     0.976
OSCT_2424
FeoA family protein.
  
  
 0.763
OSCT_1175
FeoA family protein.
 
  
 0.698
OSCT_2095
Hexapaptide repeat-containing transferase.
  
    0.618
OSCT_2096
Hypothetical protein.
       0.534
OSCT_2097
Cyclic nucleotide-binding protein.
   
   0.482
OSCT_2720
Pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein.
     
 0.426
OSCT_2098
Hypothetical protein.
       0.417
OSCT_2099
Hypothetical protein.
       0.417
Your Current Organism:
Oscillochloris trichoides
NCBI taxonomy Id: 765420
Other names: O. trichoides DG-6, Oscillochloris trichoides DG-6, Oscillochloris trichoides str. DG-6, Oscillochloris trichoides strain DG-6
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