Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
OSCT_2097Cyclic nucleotide-binding protein. (848 aa)    
Predicted Functional Partners:
OSCT_2720
Pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein.
  
 
 0.778
OSCT_2218
Histidine kinase.
  
     0.720
OSCT_2206
GAF sensor signal transduction histidine kinase.
  
  
 0.718
OSCT_2098
Hypothetical protein.
   
   0.704
OSCT_2099
Hypothetical protein.
   
   0.704
OSCT_1695
Histidine kinase.
  
 
   0.672
OSCT_2096
Hypothetical protein.
       0.651
OSCT_1230
Multi-sensor signal transduction histidine kinase.
  
 
   0.638
OSCT_2467
Multi-sensor signal transduction histidine kinase.
  
   
 0.627
OSCT_1188
Histidine kinase.
  
 
   0.623
Your Current Organism:
Oscillochloris trichoides
NCBI taxonomy Id: 765420
Other names: O. trichoides DG-6, Oscillochloris trichoides DG-6, Oscillochloris trichoides str. DG-6, Oscillochloris trichoides strain DG-6
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