STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSCT_2104Peptidase S8 and S53 subtilisin kexin sedolisin. (1001 aa)    
Predicted Functional Partners:
OSCT_0983
Peptidase S8 and S53 subtilisin kexin sedolisin; Belongs to the peptidase S8 family.
  
  0.768
OSCT_2105
Patatin.
 
     0.741
OSCT_0392
Immunoglobulin I-set domain protein.
 
 0.697
OSCT_1205
Allergen V5/Tpx-1 family protein.
  
  
  0.604
OSCT_0749
SCP-like extracellular.
  
  
  0.549
OSCT_2502
Regulator of chromosome condensation RCC1.
  
  0.546
OSCT_0748
Serine protease; Belongs to the peptidase S8 family.
 
0.537
OSCT_2791
Hypothetical protein.
  
  0.515
OSCT_2106
PHA accumulation regulator DNA-binding protein.
       0.512
OSCT_1193
Hypothetical protein.
  
 0.497
Your Current Organism:
Oscillochloris trichoides
NCBI taxonomy Id: 765420
Other names: O. trichoides DG-6, Oscillochloris trichoides DG-6, Oscillochloris trichoides str. DG-6, Oscillochloris trichoides strain DG-6
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