STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSCT_2106PHA accumulation regulator DNA-binding protein. (176 aa)    
Predicted Functional Partners:
OSCT_0099
Alpha/beta hydrolase fold-containing protein.
 
   
 0.802
OSCT_2105
Patatin.
     
 0.649
OSCT_2107
Poly(hydroxyalkanoate) granule-associated protein.
       0.517
OSCT_2104
Peptidase S8 and S53 subtilisin kexin sedolisin.
       0.512
OSCT_1431
Protein of unknown function DUF461.
  
     0.436
OSCT_2340
Glycosyl transferase group 1.
 
     0.403
Your Current Organism:
Oscillochloris trichoides
NCBI taxonomy Id: 765420
Other names: O. trichoides DG-6, Oscillochloris trichoides DG-6, Oscillochloris trichoides str. DG-6, Oscillochloris trichoides strain DG-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.