Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
OSCT_2134Band 7 protein. (367 aa)    
Predicted Functional Partners:
OSCT_2597
Cytochrome c oxidase, subunit II.
   
 
 0.792
OSCT_2129
Hypothetical protein.
 
     0.774
OSCT_2012
Chromosome segregation ATPase-like protein.
  
     0.773
OSCT_1818
Hypothetical protein.
  
     0.771
OSCT_0365
Metallophosphoesterase.
  
     0.770
OSCT_2320
Cyclic nucleotide-binding protein.
  
     0.763
OSCT_1641
Alpha/beta hydrolase fold-containing protein.
 
  
 0.752
OSCT_2680
Hypothetical protein.
  
     0.751
OSCT_2791
Hypothetical protein.
  
 0.751
OSCT_2442
Hypothetical protein.
  
     0.749
Your Current Organism:
Oscillochloris trichoides
NCBI taxonomy Id: 765420
Other names: O. trichoides DG-6, Oscillochloris trichoides DG-6, Oscillochloris trichoides str. DG-6, Oscillochloris trichoides strain DG-6
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