Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
OSCT_2135Transcriptional regulator, TetR family. (95 aa)    
Predicted Functional Partners:
OSCT_2136
Transcriptional regulator, TetR family.
      0.934
OSCT_2137
Protein of unknown function DUF214.
 
     0.818
OSCT_2138
Protein of unknown function DUF214.
 
     0.680
OSCT_2139
ABC transporter related protein.
   
   0.574
OSCT_2134
Band 7 protein.
  
    0.491
OSCT_1900
Hypothetical protein.
  
 
 0.471
OSCT_2140
Multidrug resistance efflux pump-like protein.
       0.447
OSCT_1332
TetR family transcriptional regulator.
  
     0.428
pth
aminoacyl-tRNA hydrolase; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family.
   
    0.409
OSCT_0507
Beta-ketoacyl synthase.
    
 0.404
Your Current Organism:
Oscillochloris trichoides
NCBI taxonomy Id: 765420
Other names: O. trichoides DG-6, Oscillochloris trichoides DG-6, Oscillochloris trichoides str. DG-6, Oscillochloris trichoides strain DG-6
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