OSCT_2143 protein (Oscillochloris trichoides)

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OSCT_2143

Ribosomal protein L27. (87 aa)

Predicted Functional Partners:

rplU

0.996

rpsI

0.993

rplM

0.993

rplS

0.993

rpsP

0.993

rpmE

0.992

rplC

0.991

rpsO

0.991

rplT

0.991

rplI

0.991

Your Current Organism:

Oscillochloris trichoides

NCBI taxonomy Id: 765420
Other names: O. trichoides DG-6, Oscillochloris trichoides DG-6, Oscillochloris trichoides str. DG-6, Oscillochloris trichoides strain DG-6

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
OSCT_2143	rplC	OSCT_2143	OSCT_0199	Ribosomal protein L27.	Ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	0.991
OSCT_2143	rplI	OSCT_2143	OSCT_3103	Ribosomal protein L27.	Ribosomal protein L9; Binds to the 23S rRNA.	0.991
OSCT_2143	rplM	OSCT_2143	OSCT_0172	Ribosomal protein L27.	Hypothetical protein; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	0.993
OSCT_2143	rplS	OSCT_2143	OSCT_0623	Ribosomal protein L27.	Ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.	0.993
OSCT_2143	rplT	OSCT_2143	OSCT_2584	Ribosomal protein L27.	Ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.	0.991
OSCT_2143	rplU	OSCT_2143	OSCT_2144	Ribosomal protein L27.	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.996
OSCT_2143	rpmE	OSCT_2143	OSCT_2142	Ribosomal protein L27.	Ribosomal protein L31; Binds the 23S rRNA; Belongs to the bacterial ribosomal protein bL31 family. Type A subfamily.	0.992
OSCT_2143	rpsI	OSCT_2143	OSCT_0171	Ribosomal protein L27.	Ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.	0.993
OSCT_2143	rpsO	OSCT_2143	OSCT_1128	Ribosomal protein L27.	Ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.	0.991
OSCT_2143	rpsP	OSCT_2143	OSCT_2871	Ribosomal protein L27.	Ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family.	0.993
rplC	OSCT_2143	OSCT_0199	OSCT_2143	Ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	Ribosomal protein L27.	0.991
rplC	rplI	OSCT_0199	OSCT_3103	Ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	Ribosomal protein L9; Binds to the 23S rRNA.	0.991
rplC	rplM	OSCT_0199	OSCT_0172	Ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	Hypothetical protein; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	0.997
rplC	rplS	OSCT_0199	OSCT_0623	Ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	Ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.	0.989
rplC	rplT	OSCT_0199	OSCT_2584	Ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	Ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.	0.991
rplC	rplU	OSCT_0199	OSCT_2144	Ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.976
rplC	rpmE	OSCT_0199	OSCT_2142	Ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	Ribosomal protein L31; Binds the 23S rRNA; Belongs to the bacterial ribosomal protein bL31 family. Type A subfamily.	0.909
rplC	rpsI	OSCT_0199	OSCT_0171	Ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	Ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.	0.993
rplC	rpsO	OSCT_0199	OSCT_1128	Ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	Ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.	0.989
rplC	rpsP	OSCT_0199	OSCT_2871	Ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	Ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family.	0.988

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