STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSCT_2158Resolvase related protein. (195 aa)    
Predicted Functional Partners:
OSCT_2157
Hypothetical protein.
 
    0.946
OSCT_2720
Pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein.
    
  0.897
OSCT_0420
Transposon IS605 OrfB.
 
    0.778
OSCT_0372
Transposon IS605 OrfB.
 
    0.776
OSCT_1258
Transposase.
 
    0.776
OSCT_2149
Hypothetical protein.
 
    0.774
OSCT_0018
IS605 family transposase OrfB.
 
    0.752
OSCT_1270
Transposase, IS605 OrfB family.
 
    0.752
OSCT_1047
Transposase.
 
    0.681
OSCT_3043
IS605 family transposase OrfB.
 
    0.664
Your Current Organism:
Oscillochloris trichoides
NCBI taxonomy Id: 765420
Other names: O. trichoides DG-6, Oscillochloris trichoides DG-6, Oscillochloris trichoides str. DG-6, Oscillochloris trichoides strain DG-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.