STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSCT_2196Basic membrane lipoprotein. (433 aa)    
Predicted Functional Partners:
OSCT_2199
Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.978
OSCT_2197
ABC transporter related protein.
 
 
 0.970
OSCT_2198
Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.961
OSCT_1557
Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.935
OSCT_2686
ABC transporter related protein.
 
 
 0.914
OSCT_2687
Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.901
OSCT_1325
Basic membrane lipoprotein.
  
  
 
0.794
guaA
Bifunctional GMP synthase/glutamine amidotransferase protein; Catalyzes the synthesis of GMP from XMP.
     
 0.433
OSCT_0984
Hypothetical protein.
  
     0.417
Your Current Organism:
Oscillochloris trichoides
NCBI taxonomy Id: 765420
Other names: O. trichoides DG-6, Oscillochloris trichoides DG-6, Oscillochloris trichoides str. DG-6, Oscillochloris trichoides strain DG-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.