STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSCT_2197ABC transporter related protein. (500 aa)    
Predicted Functional Partners:
OSCT_2198
Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
 0.993
OSCT_2199
Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
 0.992
OSCT_2196
Basic membrane lipoprotein.
 
 
 0.970
OSCT_2687
Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
 0.968
OSCT_1557
Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
 0.966
OSCT_1325
Basic membrane lipoprotein.
 
 
 0.958
OSCT_2686
ABC transporter related protein.
  
  
 
0.807
OSCT_0696
Putative branched-chain amino acid transport system / permease component; Belongs to the binding-protein-dependent transport system permease family.
 
     0.778
OSCT_0697
Putative periplasmic binding protein and sugar binding domain of the LacI family protein.
 
  
  0.539
OSCT_0702
Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
      0.479
Your Current Organism:
Oscillochloris trichoides
NCBI taxonomy Id: 765420
Other names: O. trichoides DG-6, Oscillochloris trichoides DG-6, Oscillochloris trichoides str. DG-6, Oscillochloris trichoides strain DG-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.