Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
OSCT_2228Hypothetical protein. (866 aa)    
Predicted Functional Partners:
OSCT_3164
Response regulator receiver.
  
  
 0.916
OSCT_0029
Response regulator receiver protein.
  
  
 0.872
OSCT_2430
CheA signal transduction histidine kinase.
  
  
 0.872
OSCT_0222
Multi-sensor signal transduction histidine kinase.
  
  
 0.844
OSCT_2703
Multi-sensor hybrid histidine kinase.
  
  
 0.844
OSCT_0811
Hypothetical protein.
  
  
 0.829
OSCT_2613
Hypothetical protein.
  
  
 0.823
OSCT_1257
Periplasmic sensor hybrid histidine kinase.
  
  
 0.790
OSCT_2229
Putative protein of poly-gamma-glutamate biosynthesis (capsule formation)-like protein.
 
     0.706
OSCT_2427
CheW protein.
  
  
 0.697
Your Current Organism:
Oscillochloris trichoides
NCBI taxonomy Id: 765420
Other names: O. trichoides DG-6, Oscillochloris trichoides DG-6, Oscillochloris trichoides str. DG-6, Oscillochloris trichoides strain DG-6
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