Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
OSCT_2234Rossmann fold nucleotide-binding protein involved in DNA uptake-like protein. (419 aa)    
Predicted Functional Partners:
OSCT_2233
ATP-dependent DNA helicase RecQ.
 
   
 0.947
OSCT_3195
Peptidase A24A domain protein.
  
  
 0.721
OSCT_2181
Hypothetical protein.
  
 
   0.682
OSCT_0519
Amidophosphoribosyltransferase-like protein.
 
 
 0.669
OSCT_1915
Hypothetical protein.
  
 
   0.669
OSCT_2392
Hydrolase.
  
     0.666
OSCT_0084
Hydrolase.
  
     0.663
OSCT_0083
Hypothetical protein.
  
     0.626
OSCT_0082
Hypothetical protein.
  
     0.609
OSCT_0079
Hypothetical protein.
  
     0.597
Your Current Organism:
Oscillochloris trichoides
NCBI taxonomy Id: 765420
Other names: O. trichoides DG-6, Oscillochloris trichoides DG-6, Oscillochloris trichoides str. DG-6, Oscillochloris trichoides strain DG-6
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.