STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSCT_2237GCN5-related N-acetyltransferase. (308 aa)    
Predicted Functional Partners:
OSCT_0551
Glutamate synthase (ferredoxin).
   
 
  0.843
OSCT_2239
Hypothetical protein.
 
     0.843
OSCT_2236
Histidine kinase.
 
     0.840
OSCT_0620
Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.
    
  0.814
OSCT_2238
Hypothetical protein.
 
  
  0.779
OSCT_2235
Two component LuxR family transcriptional regulator.
       0.726
OSCT_0643
Integral membrane sensor signal transduction histidine kinase.
  
     0.643
OSCT_3200
GCN5-related N-acetyltransferase.
 
 
 0.642
OSCT_1424
AMP-dependent synthetase and ligase.
  
 
 0.543
OSCT_1898
NAD-dependent epimerase/dehydratase.
 
     0.543
Your Current Organism:
Oscillochloris trichoides
NCBI taxonomy Id: 765420
Other names: O. trichoides DG-6, Oscillochloris trichoides DG-6, Oscillochloris trichoides str. DG-6, Oscillochloris trichoides strain DG-6
Server load: very high (>100%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.