STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
katGCatalase/peroxidase HPI; Bifunctional enzyme with both catalase and broad-spectrum peroxidase activity; Belongs to the peroxidase family. Peroxidase/catalase subfamily. (716 aa)    
Predicted Functional Partners:
OSCT_0791
Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
    
 0.622
OSCT_0985
Glutaredoxin-like domain protein.
  
  
 0.453
OSCT_2238
Hypothetical protein.
    
 0.447
OSCT_1190
Ferric uptake regulator, Fur family; Belongs to the Fur family.
    
 0.437
OSCT_1917
Ferric uptake regulator family protein; Belongs to the Fur family.
    
 0.437
OSCT_2673
Helix-turn-helix domain-containing protein.
     
 0.428
OSCT_0507
Beta-ketoacyl synthase.
      
 0.427
OSCT_1140
aromatic-L-amino-acid decarboxylase.
    
  0.421
OSCT_2239
Hypothetical protein.
       0.420
OSCT_0145
Glu/Leu/Phe/Val dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
     
  0.417
Your Current Organism:
Oscillochloris trichoides
NCBI taxonomy Id: 765420
Other names: O. trichoides DG-6, Oscillochloris trichoides DG-6, Oscillochloris trichoides str. DG-6, Oscillochloris trichoides strain DG-6
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