STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSCT_2279Hypothetical protein. (241 aa)    
Predicted Functional Partners:
phnC
Phosphonate ABC transporter, ATPase subunit; Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphonates importer (TC 3.A.1.9.1) family.
  
 
 0.811
OSCT_2221
Multi-sensor hybrid histidine kinase.
  
 
 0.789
OSCT_0230
roadblock/LC7 family protein.
 
     0.779
OSCT_0238
roadblock/LC7 family protein.
 
     0.778
sfsA
Sugar fermentation stimulation protein; Belongs to the SfsA family.
       0.752
OSCT_2054
Phosphonate metabolism protein PhnJ.
  
  
 0.739
OSCT_0235
Small GTP-binding protein.
  
     0.726
OSCT_0998
Small GTP-binding protein.
  
     0.726
OSCT_1228
Multi-sensor signal transduction histidine kinase.
    
 0.693
OSCT_2281
TPR repeat-containing transcriptional regulator LuxR.
       0.686
Your Current Organism:
Oscillochloris trichoides
NCBI taxonomy Id: 765420
Other names: O. trichoides DG-6, Oscillochloris trichoides DG-6, Oscillochloris trichoides str. DG-6, Oscillochloris trichoides strain DG-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.