Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
OSCT_2281TPR repeat-containing transcriptional regulator LuxR. (907 aa)    
Predicted Functional Partners:
OSCT_0525
Aminotransferase class I and II.
    
   0.734
sfsA
Sugar fermentation stimulation protein; Belongs to the SfsA family.
       0.705
OSCT_2279
Hypothetical protein.
       0.686
guaA
Bifunctional GMP synthase/glutamine amidotransferase protein; Catalyzes the synthesis of GMP from XMP.
     
  0.669
OSCT_0642
Response regulator.
  
  
  0.593
OSCT_2278
LPXTG-motif cell wall anchor domain protein; Belongs to the 5'-nucleotidase family.
       0.568
OSCT_0643
Integral membrane sensor signal transduction histidine kinase.
  
     0.515
OSCT_1107
Serine/threonine protein kinase.
 
      0.410
OSCT_2276
SAM-dependent methyltransferase-like protein.
       0.403
OSCT_2277
Sua5/YciO/YrdC/YwlC family protein; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine.
       0.403
Your Current Organism:
Oscillochloris trichoides
NCBI taxonomy Id: 765420
Other names: O. trichoides DG-6, Oscillochloris trichoides DG-6, Oscillochloris trichoides str. DG-6, Oscillochloris trichoides strain DG-6
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