Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
OSCT_2284Von Willebrand factor type A. (542 aa)    
Predicted Functional Partners:
OSCT_1380
Binding-protein-dependent transport systems inner membrane component.
  
 0.989
OSCT_1536
ABC transporter related protein; Belongs to the ABC transporter superfamily.
  
 0.989
guaA
Bifunctional GMP synthase/glutamine amidotransferase protein; Catalyzes the synthesis of GMP from XMP.
    
 0.820
OSCT_2613
Hypothetical protein.
    
  0.789
OSCT_2285
Hypothetical protein.
     
0.783
OSCT_2283
Hypothetical protein.
       0.773
OSCT_2341
Magnesium chelatase ATPase subunit D; Involved in bacteriochlorophyll biosynthesis; introduces a magnesium ion into protoporphyrin IX to yield Mg-protoporphyrin IX.
  
 0.655
OSCT_1381
Binding-protein-dependent transport systems inner membrane component.
    
 0.595
OSCT_1810
Von Willebrand factor type A.
 
     0.575
OSCT_2189
Lytic transglycosylase catalytic.
     
 0.574
Your Current Organism:
Oscillochloris trichoides
NCBI taxonomy Id: 765420
Other names: O. trichoides DG-6, Oscillochloris trichoides DG-6, Oscillochloris trichoides str. DG-6, Oscillochloris trichoides strain DG-6
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